| Full name: leucine rich repeat containing 29 | Alias Symbol: FBL9 | ||
| Type: protein-coding gene | Cytoband: 16q22.1 | ||
| Entrez ID: 26231 | HGNC ID: HGNC:13605 | Ensembl Gene: ENSG00000125122 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LRRC29:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LRRC29 | 26231 | 232545_at | -0.5573 | 0.1327 | |
| GSE26886 | LRRC29 | 26231 | 232545_at | -0.1742 | 0.2270 | |
| GSE45670 | LRRC29 | 26231 | 232545_at | -0.1118 | 0.3974 | |
| GSE53622 | LRRC29 | 26231 | 82647 | -0.3726 | 0.0006 | |
| GSE53624 | LRRC29 | 26231 | 82647 | -0.0983 | 0.1791 | |
| GSE63941 | LRRC29 | 26231 | 232545_at | -0.1341 | 0.4670 | |
| GSE77861 | LRRC29 | 26231 | 232545_at | -0.3958 | 0.0098 | |
| SRP133303 | LRRC29 | 26231 | RNAseq | -0.1980 | 0.5047 | |
| SRP159526 | LRRC29 | 26231 | RNAseq | 0.9730 | 0.0572 | |
| SRP193095 | LRRC29 | 26231 | RNAseq | 0.7470 | 0.0000 | |
| SRP219564 | LRRC29 | 26231 | RNAseq | -0.2017 | 0.5853 | |
| TCGA | LRRC29 | 26231 | RNAseq | -0.0494 | 0.7602 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LRRC29 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of LRRC29:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LRRC29 | 26231 | 9 | 2 | 19 | |
| GSE20123 | LRRC29 | 26231 | 9 | 2 | 19 | |
| GSE43470 | LRRC29 | 26231 | 1 | 9 | 33 | |
| GSE46452 | LRRC29 | 26231 | 38 | 1 | 20 | |
| GSE47630 | LRRC29 | 26231 | 10 | 8 | 22 | |
| GSE54993 | LRRC29 | 26231 | 2 | 4 | 64 | |
| GSE54994 | LRRC29 | 26231 | 8 | 10 | 35 | |
| GSE60625 | LRRC29 | 26231 | 4 | 0 | 7 | |
| GSE74703 | LRRC29 | 26231 | 1 | 6 | 29 | |
| GSE74704 | LRRC29 | 26231 | 5 | 1 | 14 | |
| TCGA | LRRC29 | 26231 | 29 | 12 | 55 |
Total number of gains: 116; Total number of losses: 55; Total Number of normals: 317.
Somatic mutations of LRRC29:
Generating mutation plots.
Highly correlated genes for LRRC29:
Showing top 20/590 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LRRC29 | MAB21L3 | 0.803001 | 3 | 0 | 3 |
| LRRC29 | ABLIM1 | 0.77451 | 3 | 0 | 3 |
| LRRC29 | PADI1 | 0.771536 | 3 | 0 | 3 |
| LRRC29 | DENND2C | 0.76452 | 3 | 0 | 3 |
| LRRC29 | NEBL | 0.764216 | 3 | 0 | 3 |
| LRRC29 | LMO7 | 0.763003 | 3 | 0 | 3 |
| LRRC29 | MMEL1 | 0.760736 | 4 | 0 | 4 |
| LRRC29 | FCHO2 | 0.755631 | 3 | 0 | 3 |
| LRRC29 | PIM1 | 0.751929 | 3 | 0 | 3 |
| LRRC29 | C1orf116 | 0.750156 | 3 | 0 | 3 |
| LRRC29 | CHP1 | 0.75007 | 3 | 0 | 3 |
| LRRC29 | DTX2 | 0.749194 | 3 | 0 | 3 |
| LRRC29 | EPB41L3 | 0.749006 | 3 | 0 | 3 |
| LRRC29 | ACPP | 0.748106 | 3 | 0 | 3 |
| LRRC29 | SASH1 | 0.746237 | 3 | 0 | 3 |
| LRRC29 | RIOK3 | 0.741533 | 3 | 0 | 3 |
| LRRC29 | EMP1 | 0.739234 | 3 | 0 | 3 |
| LRRC29 | BRK1 | 0.736407 | 3 | 0 | 3 |
| LRRC29 | NAGK | 0.73472 | 3 | 0 | 3 |
| LRRC29 | CCL24 | 0.734512 | 3 | 0 | 3 |
For details and further investigation, click here
