MEST

 

Full name: mesoderm specific transcript Alias Symbol: PEG1
Type: protein-coding gene Cytoband: 7q32.2
Entrez ID: 4232 HGNC ID: HGNC:7028 Ensembl Gene: ENSG00000106484 OMIM ID: 601029
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of MEST:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 MEST 4232 202016_at 1.8122 0.0117
GSE20347 MEST 4232 202016_at 2.3384 0.0000
GSE23400 MEST 4232 202016_at 1.6827 0.0000
GSE26886 MEST 4232 202016_at 1.6044 0.0060
GSE29001 MEST 4232 202016_at 1.4726 0.0036
GSE38129 MEST 4232 202016_at 2.4275 0.0000
GSE45670 MEST 4232 202016_at 1.8390 0.0001
GSE53622 MEST 4232 20571 2.2103 0.0000
GSE53624 MEST 4232 20571 2.1199 0.0000
GSE63941 MEST 4232 202016_at -0.4528 0.8675
GSE77861 MEST 4232 202016_at 2.4710 0.0005
GSE97050 MEST 4232 A_23_P156970 0.9984 0.2148
SRP007169 MEST 4232 RNAseq 2.8811 0.0000
SRP008496 MEST 4232 RNAseq 2.4570 0.0000
SRP064894 MEST 4232 RNAseq 2.1208 0.0000
SRP133303 MEST 4232 RNAseq 1.2975 0.0000
SRP159526 MEST 4232 RNAseq 2.9803 0.0000
SRP193095 MEST 4232 RNAseq 1.3829 0.0000
SRP219564 MEST 4232 RNAseq 2.3026 0.0002
TCGA MEST 4232 RNAseq 0.7088 0.0000

Upregulated datasets: 17; Downregulated datasets: 0.  


 

Survival by MEST expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of MEST:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 MEST 4232 8 1 21
GSE20123 MEST 4232 8 1 21
GSE43470 MEST 4232 2 3 38
GSE46452 MEST 4232 7 2 50
GSE47630 MEST 4232 7 4 29
GSE54993 MEST 4232 3 5 62
GSE54994 MEST 4232 7 7 39
GSE60625 MEST 4232 0 0 11
GSE74703 MEST 4232 2 3 31
GSE74704 MEST 4232 4 1 15
TCGA MEST 4232 28 21 47

Total number of gains: 76; Total number of losses: 48; Total Number of normals: 364.  


 

Somatic mutations of MEST:

 

Generating mutation plots.

 

Highly correlated genes for MEST:

 

Showing top 20/1848 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
MESTCDCA50.823628505
MESTPNPT10.802724606
MESTECT20.7954611010
MESTRUVBL10.79504210010
MESTTIMELESS0.78812911011
MESTUBE2T0.781779707
MESTCKS1B0.77992711010
MESTRFC40.77763511010
MESTMCM20.76962711010
MESTCENPF0.76793711011
MESTCMSS10.759479606
MESTTPX20.75772511011
MESTTNFAIP8L10.756394404
MESTXPO10.753422909
MESTHOXC90.751183404
MESTBID0.7510311011
MESTKNTC10.7490481009
MESTCENPN0.74667510010
MESTTOP2A0.74616811011
MESTUHRF10.74539706

For details and further investigation, click here