| Full name: prostate cancer associated transcript 19 | Alias Symbol: LINC01190 | ||
| Type: non-coding RNA | Cytoband: 19q13.2 | ||
| Entrez ID: 100505495 | HGNC ID: HGNC:49593 | Ensembl Gene: ENSG00000267107 | OMIM ID: 618192 |
Expression of PCAT19:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PCAT19 | 100505495 | 230132_at | -0.0699 | 0.8957 | |
| GSE26886 | PCAT19 | 100505495 | 230132_at | -0.3344 | 0.0052 | |
| GSE45670 | PCAT19 | 100505495 | 230132_at | -0.2928 | 0.0967 | |
| GSE53622 | PCAT19 | 100505495 | 68333 | -0.0269 | 0.6911 | |
| GSE53624 | PCAT19 | 100505495 | 9208 | -0.0054 | 0.9454 | |
| GSE63941 | PCAT19 | 100505495 | 230132_at | 0.1958 | 0.1454 | |
| GSE77861 | PCAT19 | 100505495 | 230132_at | 0.0603 | 0.5834 | |
| SRP007169 | PCAT19 | 100505495 | RNAseq | 1.2824 | 0.0743 | |
| SRP064894 | PCAT19 | 100505495 | RNAseq | -0.0317 | 0.9194 | |
| SRP133303 | PCAT19 | 100505495 | RNAseq | -0.0569 | 0.7986 | |
| SRP159526 | PCAT19 | 100505495 | RNAseq | 0.0379 | 0.9107 | |
| SRP193095 | PCAT19 | 100505495 | RNAseq | 0.5834 | 0.0000 | |
| SRP219564 | PCAT19 | 100505495 | RNAseq | 0.2073 | 0.7601 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by PCAT19 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of PCAT19:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PCAT19 | 100505495 | 4 | 4 | 22 | |
| GSE20123 | PCAT19 | 100505495 | 4 | 3 | 23 | |
| GSE43470 | PCAT19 | 100505495 | 3 | 11 | 29 | |
| GSE46452 | PCAT19 | 100505495 | 48 | 1 | 10 | |
| GSE47630 | PCAT19 | 100505495 | 9 | 5 | 26 | |
| GSE54993 | PCAT19 | 100505495 | 17 | 4 | 49 | |
| GSE54994 | PCAT19 | 100505495 | 7 | 11 | 35 | |
| GSE60625 | PCAT19 | 100505495 | 9 | 0 | 2 | |
| GSE74703 | PCAT19 | 100505495 | 3 | 7 | 26 | |
| GSE74704 | PCAT19 | 100505495 | 4 | 1 | 15 |
Total number of gains: 108; Total number of losses: 47; Total Number of normals: 237.
Somatic mutations of PCAT19:
Generating mutation plots.
Highly correlated genes for PCAT19:
Showing top 20/33 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PCAT19 | CD93 | 0.733315 | 3 | 0 | 3 |
| PCAT19 | TIE1 | 0.70309 | 3 | 0 | 3 |
| PCAT19 | SPRR4 | 0.690171 | 3 | 0 | 3 |
| PCAT19 | SH2B3 | 0.686728 | 3 | 0 | 3 |
| PCAT19 | ENG | 0.680164 | 3 | 0 | 3 |
| PCAT19 | RARRES2 | 0.677253 | 3 | 0 | 3 |
| PCAT19 | LILRA2 | 0.656476 | 3 | 0 | 3 |
| PCAT19 | GNG11 | 0.650565 | 3 | 0 | 3 |
| PCAT19 | IL1R1 | 0.637072 | 3 | 0 | 3 |
| PCAT19 | IGFBP4 | 0.631796 | 3 | 0 | 3 |
| PCAT19 | PECAM1 | 0.627368 | 4 | 0 | 3 |
| PCAT19 | ECSCR | 0.626134 | 4 | 0 | 3 |
| PCAT19 | PCDH12 | 0.617564 | 3 | 0 | 3 |
| PCAT19 | ALDH3A1 | 0.614997 | 3 | 0 | 3 |
| PCAT19 | CD34 | 0.609202 | 3 | 0 | 3 |
| PCAT19 | HTR2A | 0.601584 | 3 | 0 | 3 |
| PCAT19 | CDH5 | 0.601178 | 5 | 0 | 3 |
| PCAT19 | PLVAP | 0.598664 | 3 | 0 | 3 |
| PCAT19 | ERG | 0.589423 | 3 | 0 | 3 |
| PCAT19 | TM4SF18 | 0.588894 | 4 | 0 | 3 |
For details and further investigation, click here
