RIT1

 

Full name: Ras like without CAAX 1 Alias Symbol: RIBB|ROC1|MGC125864|MGC125865
Type: protein-coding gene Cytoband: 1q22
Entrez ID: 6016 HGNC ID: HGNC:10023 Ensembl Gene: ENSG00000143622 OMIM ID: 609591
Drug and gene relationship at DGIdb
Screen Evidence:
  • This gene has been idenfitied as a common driver in this paper.
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of RIT1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 RIT1 6016 209882_at -0.2347 0.8012
GSE20347 RIT1 6016 209882_at -0.7742 0.0065
GSE23400 RIT1 6016 209882_at -0.3483 0.0149
GSE26886 RIT1 6016 236224_at -1.1698 0.0218
GSE29001 RIT1 6016 209882_at -0.9227 0.0843
GSE38129 RIT1 6016 209882_at -0.0977 0.7946
GSE45670 RIT1 6016 209882_at -0.0280 0.9289
GSE53622 RIT1 6016 23439 0.2418 0.0161
GSE53624 RIT1 6016 23439 -0.0698 0.4670
GSE63941 RIT1 6016 209882_at -0.0201 0.9789
GSE77861 RIT1 6016 209882_at -0.2961 0.4171
GSE97050 RIT1 6016 A_33_P3394075 -0.0338 0.9163
SRP007169 RIT1 6016 RNAseq -0.6305 0.1901
SRP008496 RIT1 6016 RNAseq -0.0328 0.9314
SRP064894 RIT1 6016 RNAseq -0.8952 0.0000
SRP133303 RIT1 6016 RNAseq -0.2105 0.2981
SRP159526 RIT1 6016 RNAseq 0.4248 0.3421
SRP193095 RIT1 6016 RNAseq -0.4679 0.0224
SRP219564 RIT1 6016 RNAseq -0.7976 0.1048
TCGA RIT1 6016 RNAseq 0.1064 0.1998

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by RIT1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of RIT1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 RIT1 6016 14 0 16
GSE20123 RIT1 6016 13 0 17
GSE43470 RIT1 6016 7 2 34
GSE46452 RIT1 6016 2 1 56
GSE47630 RIT1 6016 14 0 26
GSE54993 RIT1 6016 0 5 65
GSE54994 RIT1 6016 16 0 37
GSE60625 RIT1 6016 0 0 11
GSE74703 RIT1 6016 7 2 27
GSE74704 RIT1 6016 6 0 14
TCGA RIT1 6016 38 2 56

Total number of gains: 117; Total number of losses: 12; Total Number of normals: 359.  


 

Somatic mutations of RIT1:

 

Generating mutation plots.

 

Highly correlated genes for RIT1:

 

Showing top 20/145 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
RIT1TP53INP10.76092303
RIT1PHLDB30.733207404
RIT1CARD60.704594303
RIT1TAF1B0.680872303
RIT1PGD0.65291410010
RIT1MUC150.646636303
RIT1DAPL10.640457303
RIT1KRT360.632485303
RIT1NAMPT0.631247908
RIT1GJB20.629293303
RIT1CDRT10.623527403
RIT1ZNF780A0.622099403
RIT1HEBP10.616858403
RIT1TRIM160.6080171007
RIT1SC5D0.605295705
RIT1CYP4F30.60487411010
RIT1DNASE10.603432403
RIT1ME10.60121007
RIT1PCDH10.60084503
RIT1ADK0.598052604

For details and further investigation, click here