| Full name: ring finger protein 13 | Alias Symbol: RZF | ||
| Type: protein-coding gene | Cytoband: 3q25.1 | ||
| Entrez ID: 11342 | HGNC ID: HGNC:10057 | Ensembl Gene: ENSG00000082996 | OMIM ID: 609247 |
| Drug and gene relationship at DGIdb | |||
Expression of RNF13:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RNF13 | 11342 | 201779_s_at | 0.2067 | 0.4413 | |
| GSE20347 | RNF13 | 11342 | 201779_s_at | 0.5805 | 0.0001 | |
| GSE23400 | RNF13 | 11342 | 201779_s_at | 0.5015 | 0.0000 | |
| GSE26886 | RNF13 | 11342 | 201780_s_at | 0.4648 | 0.0873 | |
| GSE29001 | RNF13 | 11342 | 201779_s_at | 0.4607 | 0.2714 | |
| GSE38129 | RNF13 | 11342 | 201779_s_at | 0.3774 | 0.0005 | |
| GSE45670 | RNF13 | 11342 | 201779_s_at | -0.0091 | 0.9694 | |
| GSE53622 | RNF13 | 11342 | 83408 | 0.1423 | 0.0080 | |
| GSE53624 | RNF13 | 11342 | 83408 | 0.3073 | 0.0000 | |
| GSE63941 | RNF13 | 11342 | 201779_s_at | 0.0465 | 0.9377 | |
| GSE77861 | RNF13 | 11342 | 201779_s_at | 0.8845 | 0.0032 | |
| GSE97050 | RNF13 | 11342 | A_32_P131367 | 0.1876 | 0.4797 | |
| SRP007169 | RNF13 | 11342 | RNAseq | 0.5754 | 0.0689 | |
| SRP008496 | RNF13 | 11342 | RNAseq | 0.6533 | 0.0002 | |
| SRP064894 | RNF13 | 11342 | RNAseq | 0.5217 | 0.0023 | |
| SRP133303 | RNF13 | 11342 | RNAseq | 0.5378 | 0.0002 | |
| SRP159526 | RNF13 | 11342 | RNAseq | 0.7020 | 0.1011 | |
| SRP193095 | RNF13 | 11342 | RNAseq | 0.4791 | 0.0038 | |
| SRP219564 | RNF13 | 11342 | RNAseq | 0.1974 | 0.5524 | |
| TCGA | RNF13 | 11342 | RNAseq | 0.0573 | 0.2496 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by RNF13 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RNF13:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RNF13 | 11342 | 22 | 0 | 8 | |
| GSE20123 | RNF13 | 11342 | 22 | 0 | 8 | |
| GSE43470 | RNF13 | 11342 | 23 | 0 | 20 | |
| GSE46452 | RNF13 | 11342 | 18 | 2 | 39 | |
| GSE47630 | RNF13 | 11342 | 19 | 3 | 18 | |
| GSE54993 | RNF13 | 11342 | 1 | 10 | 59 | |
| GSE54994 | RNF13 | 11342 | 37 | 1 | 15 | |
| GSE60625 | RNF13 | 11342 | 0 | 6 | 5 | |
| GSE74703 | RNF13 | 11342 | 20 | 0 | 16 | |
| GSE74704 | RNF13 | 11342 | 15 | 0 | 5 | |
| TCGA | RNF13 | 11342 | 72 | 1 | 23 |
Total number of gains: 249; Total number of losses: 23; Total Number of normals: 216.
Somatic mutations of RNF13:
Generating mutation plots.
Highly correlated genes for RNF13:
Showing top 20/1073 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RNF13 | EFTUD2 | 0.822737 | 3 | 0 | 3 |
| RNF13 | SGMS1 | 0.805831 | 3 | 0 | 3 |
| RNF13 | MIB1 | 0.77921 | 4 | 0 | 4 |
| RNF13 | POLR3C | 0.765224 | 3 | 0 | 3 |
| RNF13 | MTO1 | 0.757186 | 3 | 0 | 3 |
| RNF13 | MED10 | 0.755862 | 3 | 0 | 3 |
| RNF13 | SYNE2 | 0.753209 | 3 | 0 | 3 |
| RNF13 | NEIL2 | 0.74463 | 3 | 0 | 3 |
| RNF13 | CPSF3 | 0.744437 | 3 | 0 | 3 |
| RNF13 | COPS4 | 0.742807 | 3 | 0 | 3 |
| RNF13 | RBBP6 | 0.742231 | 3 | 0 | 3 |
| RNF13 | CBFA2T2 | 0.741276 | 3 | 0 | 3 |
| RNF13 | RBM22 | 0.737564 | 4 | 0 | 4 |
| RNF13 | ASXL2 | 0.737085 | 5 | 0 | 5 |
| RNF13 | PHF3 | 0.737075 | 3 | 0 | 3 |
| RNF13 | DDX20 | 0.732582 | 3 | 0 | 3 |
| RNF13 | SEC22C | 0.732241 | 3 | 0 | 3 |
| RNF13 | WIPF1 | 0.723779 | 3 | 0 | 3 |
| RNF13 | DDIT3 | 0.723338 | 4 | 0 | 4 |
| RNF13 | COG2 | 0.722007 | 5 | 0 | 5 |
For details and further investigation, click here
