S100A12

 

Full name: S100 calcium binding protein A12 Alias Symbol: p6|MRP6|CGRP|CAAF1|CAGC|ENRAGE
Type: protein-coding gene Cytoband: 1q21.3
Entrez ID: 6283 HGNC ID: HGNC:10489 Ensembl Gene: ENSG00000163221 OMIM ID: 603112
Drug and gene relationship at DGIdb

 

Expression of S100A12:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 S100A12 6283 205863_at 0.0437 0.9891
GSE20347 S100A12 6283 205863_at -1.8557 0.0144
GSE23400 S100A12 6283 205863_at -1.2162 0.0000
GSE26886 S100A12 6283 205863_at -3.8836 0.0000
GSE29001 S100A12 6283 205863_at -2.1801 0.0085
GSE38129 S100A12 6283 205863_at -1.4384 0.0432
GSE45670 S100A12 6283 205863_at 1.3064 0.0042
GSE53622 S100A12 6283 64033 -0.4971 0.1212
GSE53624 S100A12 6283 64033 -1.5282 0.0000
GSE63941 S100A12 6283 205863_at 0.4420 0.3910
GSE77861 S100A12 6283 205863_at -0.7122 0.3259
GSE97050 S100A12 6283 A_23_P74001 0.0627 0.9516
SRP007169 S100A12 6283 RNAseq -3.7899 0.0002
SRP008496 S100A12 6283 RNAseq -2.3287 0.0259
SRP064894 S100A12 6283 RNAseq -1.0596 0.0421
SRP133303 S100A12 6283 RNAseq -1.1226 0.0281
SRP159526 S100A12 6283 RNAseq -1.6481 0.0811
SRP219564 S100A12 6283 RNAseq -2.9634 0.0048
TCGA S100A12 6283 RNAseq 1.1068 0.0052

Upregulated datasets: 2; Downregulated datasets: 11.  


 

Survival by S100A12 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of S100A12:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 S100A12 6283 14 0 16
GSE20123 S100A12 6283 14 0 16
GSE43470 S100A12 6283 6 2 35
GSE46452 S100A12 6283 2 1 56
GSE47630 S100A12 6283 15 0 25
GSE54993 S100A12 6283 0 4 66
GSE54994 S100A12 6283 16 0 37
GSE60625 S100A12 6283 0 0 11
GSE74703 S100A12 6283 6 1 29
GSE74704 S100A12 6283 7 0 13
TCGA S100A12 6283 40 2 54

Total number of gains: 120; Total number of losses: 10; Total Number of normals: 358.  


 

Somatic mutations of S100A12:

 

Generating mutation plots.

 

Highly correlated genes for S100A12:

 

Showing top 20/787 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
S100A12S100A90.76885611011
S100A12GJB60.751982606
S100A12ITGAD0.748338303
S100A12SBSN0.746002606
S100A12SPRR2A0.743856303
S100A12SPRR2B0.737672404
S100A12SPRR1B0.73081212011
S100A12TMEM45B0.729281606
S100A12TGM10.72611211011
S100A12IL36RN0.7240971009
S100A12SERPINB30.720765706
S100A12LYPD30.71232411010
S100A12FUT20.709512807
S100A12METRNL0.70889606
S100A12ZNF1850.70751510010
S100A12S100A80.70274811011
S100A12CNFN0.702458605
S100A12PDZK1IP10.70177712012
S100A12IVL0.70032910010
S100A12TREX20.695476303

For details and further investigation, click here