SDR9C7

 

Full name: short chain dehydrogenase/reductase family 9C member 7 Alias Symbol: SDR-O|RDHS
Type: protein-coding gene Cytoband: 12q13.3
Entrez ID: 121214 HGNC ID: HGNC:29958 Ensembl Gene: ENSG00000170426 OMIM ID: 609769
Drug and gene relationship at DGIdb

 

Expression of SDR9C7:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SDR9C7 121214 1553077_at -0.4522 0.8114
GSE26886 SDR9C7 121214 1553077_at -1.5945 0.0000
GSE45670 SDR9C7 121214 1553077_at 0.1447 0.7960
GSE53622 SDR9C7 121214 77587 -0.9139 0.0007
GSE53624 SDR9C7 121214 77587 -1.9935 0.0000
GSE63941 SDR9C7 121214 1553077_at 0.1852 0.3111
GSE77861 SDR9C7 121214 1553077_at -0.4505 0.0627
SRP007169 SDR9C7 121214 RNAseq -4.3754 0.0000
SRP008496 SDR9C7 121214 RNAseq -3.1964 0.0002
SRP064894 SDR9C7 121214 RNAseq -2.1065 0.0000
SRP133303 SDR9C7 121214 RNAseq -1.3098 0.0279
SRP159526 SDR9C7 121214 RNAseq -2.8310 0.0021
TCGA SDR9C7 121214 RNAseq 0.8958 0.1104

Upregulated datasets: 0; Downregulated datasets: 7.  


 

Survival by SDR9C7 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SDR9C7:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SDR9C7 121214 7 1 22
GSE20123 SDR9C7 121214 7 0 23
GSE43470 SDR9C7 121214 3 0 40
GSE46452 SDR9C7 121214 8 1 50
GSE47630 SDR9C7 121214 10 2 28
GSE54993 SDR9C7 121214 0 5 65
GSE54994 SDR9C7 121214 4 1 48
GSE60625 SDR9C7 121214 0 0 11
GSE74703 SDR9C7 121214 3 0 33
GSE74704 SDR9C7 121214 4 0 16
TCGA SDR9C7 121214 14 10 72

Total number of gains: 60; Total number of losses: 20; Total Number of normals: 408.  


 

Somatic mutations of SDR9C7:

 

Generating mutation plots.

 

Highly correlated genes for SDR9C7:

 

Showing top 20/836 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SDR9C7IL36RN0.797797505
SDR9C7RAD21L10.782433303
SDR9C7PLIN30.749413606
SDR9C7TGM10.729565706
SDR9C7SBSN0.726315707
SDR9C7LYNX10.722964606
SDR9C7CNFN0.719567706
SDR9C7CWH430.719031505
SDR9C7KRT800.712786706
SDR9C7IL36A0.710345505
SDR9C7OSTF10.707843505
SDR9C7P2RX30.707623303
SDR9C7CYSRT10.70728505
SDR9C7ORMDL20.703973404
SDR9C7SPRR2B0.703944303
SDR9C7SPRR2E0.700721303
SDR9C7HMOX20.696623606
SDR9C7CRCT10.692065808
SDR9C7C15orf480.690709505
SDR9C7TMPRSS11E0.689946605

For details and further investigation, click here