SH3RF2

 

Full name: SH3 domain containing ring finger 2 Alias Symbol: FLJ23654|RNF158|Hepp1|POSHER
Type: protein-coding gene Cytoband: 5q32
Entrez ID: 153769 HGNC ID: HGNC:26299 Ensembl Gene: ENSG00000156463 OMIM ID: 613377
Drug and gene relationship at DGIdb

 

Expression of SH3RF2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SH3RF2 153769 243582_at -1.1681 0.1793
GSE26886 SH3RF2 153769 243582_at -2.1329 0.0001
GSE45670 SH3RF2 153769 243582_at -0.5539 0.0253
GSE53622 SH3RF2 153769 30966 -1.1146 0.0000
GSE53624 SH3RF2 153769 30966 -1.2538 0.0000
GSE63941 SH3RF2 153769 228892_at 2.5473 0.0014
GSE77861 SH3RF2 153769 238827_at -0.2650 0.4839
GSE97050 SH3RF2 153769 A_24_P120537 0.6500 0.5183
SRP007169 SH3RF2 153769 RNAseq -1.6050 0.0000
SRP008496 SH3RF2 153769 RNAseq -1.8340 0.0000
SRP064894 SH3RF2 153769 RNAseq -1.4761 0.0001
SRP133303 SH3RF2 153769 RNAseq -1.5048 0.0000
SRP159526 SH3RF2 153769 RNAseq -2.0196 0.0016
SRP193095 SH3RF2 153769 RNAseq -1.1241 0.0000
SRP219564 SH3RF2 153769 RNAseq -2.3246 0.0141
TCGA SH3RF2 153769 RNAseq -0.1744 0.1897

Upregulated datasets: 1; Downregulated datasets: 10.  


 

Survival by SH3RF2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SH3RF2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SH3RF2 153769 1 12 17
GSE20123 SH3RF2 153769 1 12 17
GSE43470 SH3RF2 153769 2 9 32
GSE46452 SH3RF2 153769 0 27 32
GSE47630 SH3RF2 153769 1 19 20
GSE54993 SH3RF2 153769 9 1 60
GSE54994 SH3RF2 153769 2 14 37
GSE60625 SH3RF2 153769 0 0 11
GSE74703 SH3RF2 153769 2 7 27
GSE74704 SH3RF2 153769 1 7 12
TCGA SH3RF2 153769 3 40 53

Total number of gains: 22; Total number of losses: 148; Total Number of normals: 318.  


 

Somatic mutations of SH3RF2:

 

Generating mutation plots.

 

Highly correlated genes for SH3RF2:

 

Showing top 20/837 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SH3RF2ARAP20.799225303
SH3RF2SLPI0.762266707
SH3RF2KRT6C0.754462303
SH3RF2EHF0.752544808
SH3RF2MAST40.746204505
SH3RF2LCN20.742458606
SH3RF2CTNND10.734176303
SH3RF2CTNNBIP10.727274404
SH3RF2CDH10.718715505
SH3RF2FZD100.71731303
SH3RF2SDR16C50.71126404
SH3RF2CKMT1A0.710667303
SH3RF2BTBD110.710459606
SH3RF2CWH430.710208504
SH3RF2DSG30.706857807
SH3RF2TMPRSS11D0.706376606
SH3RF2KRT830.705607403
SH3RF2MAL20.705133707
SH3RF2FAM83C0.704959505
SH3RF2DSC20.704756808

For details and further investigation, click here