| Full name: SOCS2 antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 12q22 | ||
| Entrez ID: 144481 | HGNC ID: HGNC:27054 | Ensembl Gene: ENSG00000246985 | OMIM ID: 617269 |
| Drug and gene relationship at DGIdb | |||
Expression of SOCS2-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SOCS2-AS1 | 144481 | 1559315_s_at | -0.4265 | 0.1327 | |
| GSE26886 | SOCS2-AS1 | 144481 | 1559315_s_at | 0.1940 | 0.0354 | |
| GSE45670 | SOCS2-AS1 | 144481 | 1559315_s_at | -0.4631 | 0.0001 | |
| GSE53622 | SOCS2-AS1 | 144481 | 96400 | -0.5959 | 0.0000 | |
| GSE53624 | SOCS2-AS1 | 144481 | 96400 | -0.1526 | 0.0912 | |
| GSE63941 | SOCS2-AS1 | 144481 | 1559315_s_at | 0.0901 | 0.9153 | |
| GSE77861 | SOCS2-AS1 | 144481 | 1559315_s_at | 0.0232 | 0.8771 | |
| SRP219564 | SOCS2-AS1 | 144481 | RNAseq | -0.2390 | 0.6116 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SOCS2-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of SOCS2-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SOCS2-AS1 | 144481 | 3 | 2 | 25 | |
| GSE20123 | SOCS2-AS1 | 144481 | 3 | 2 | 25 | |
| GSE43470 | SOCS2-AS1 | 144481 | 3 | 0 | 40 | |
| GSE46452 | SOCS2-AS1 | 144481 | 9 | 1 | 49 | |
| GSE47630 | SOCS2-AS1 | 144481 | 10 | 1 | 29 | |
| GSE54993 | SOCS2-AS1 | 144481 | 0 | 5 | 65 | |
| GSE54994 | SOCS2-AS1 | 144481 | 5 | 2 | 46 | |
| GSE60625 | SOCS2-AS1 | 144481 | 0 | 0 | 11 | |
| GSE74703 | SOCS2-AS1 | 144481 | 3 | 0 | 33 | |
| GSE74704 | SOCS2-AS1 | 144481 | 1 | 2 | 17 |
Total number of gains: 37; Total number of losses: 15; Total Number of normals: 340.
Somatic mutations of SOCS2-AS1:
Generating mutation plots.
Highly correlated genes for SOCS2-AS1:
Showing top 20/47 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SOCS2-AS1 | SOCS2 | 0.741709 | 5 | 0 | 5 |
| SOCS2-AS1 | LINC00494 | 0.6341 | 3 | 0 | 3 |
| SOCS2-AS1 | GREM2 | 0.627381 | 3 | 0 | 3 |
| SOCS2-AS1 | TGFBR3 | 0.62605 | 3 | 0 | 3 |
| SOCS2-AS1 | FAM107A | 0.624088 | 3 | 0 | 3 |
| SOCS2-AS1 | ARHGAP31 | 0.617176 | 3 | 0 | 3 |
| SOCS2-AS1 | SARDH | 0.613581 | 3 | 0 | 3 |
| SOCS2-AS1 | HMCN2 | 0.598439 | 3 | 0 | 3 |
| SOCS2-AS1 | ANGPTL1 | 0.591225 | 3 | 0 | 3 |
| SOCS2-AS1 | CFD | 0.589495 | 3 | 0 | 3 |
| SOCS2-AS1 | SLIT2 | 0.585771 | 3 | 0 | 3 |
| SOCS2-AS1 | F10 | 0.585301 | 4 | 0 | 3 |
| SOCS2-AS1 | RCAN2 | 0.57999 | 3 | 0 | 3 |
| SOCS2-AS1 | TMUB1 | 0.573625 | 4 | 0 | 3 |
| SOCS2-AS1 | LINC00312 | 0.573533 | 3 | 0 | 3 |
| SOCS2-AS1 | SRD5A2 | 0.569194 | 3 | 0 | 3 |
| SOCS2-AS1 | ZNF483 | 0.563701 | 3 | 0 | 3 |
| SOCS2-AS1 | PCP4 | 0.562882 | 3 | 0 | 3 |
| SOCS2-AS1 | S1PR1 | 0.560077 | 3 | 0 | 3 |
| SOCS2-AS1 | KLHL31 | 0.559817 | 3 | 0 | 3 |
For details and further investigation, click here
