| Full name: spermatogenesis associated 17 | Alias Symbol: IQCH | ||
| Type: protein-coding gene | Cytoband: 1q41 | ||
| Entrez ID: 128153 | HGNC ID: HGNC:25184 | Ensembl Gene: ENSG00000162814 | OMIM ID: 611032 |
| Drug and gene relationship at DGIdb | |||
Expression of SPATA17:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SPATA17 | 128153 | 230763_at | 0.5212 | 0.2107 | |
| GSE26886 | SPATA17 | 128153 | 230763_at | 2.4479 | 0.0000 | |
| GSE45670 | SPATA17 | 128153 | 230763_at | 0.5897 | 0.0296 | |
| GSE53622 | SPATA17 | 128153 | 130232 | 1.1031 | 0.0000 | |
| GSE53624 | SPATA17 | 128153 | 130232 | 1.7385 | 0.0000 | |
| GSE63941 | SPATA17 | 128153 | 230763_at | 1.0701 | 0.3129 | |
| GSE77861 | SPATA17 | 128153 | 230763_at | 0.4651 | 0.1992 | |
| SRP064894 | SPATA17 | 128153 | RNAseq | 0.0996 | 0.7479 | |
| SRP133303 | SPATA17 | 128153 | RNAseq | 0.0067 | 0.9588 | |
| SRP159526 | SPATA17 | 128153 | RNAseq | 1.2058 | 0.0344 | |
| SRP193095 | SPATA17 | 128153 | RNAseq | -0.0062 | 0.9619 | |
| SRP219564 | SPATA17 | 128153 | RNAseq | -0.1492 | 0.7564 | |
| TCGA | SPATA17 | 128153 | RNAseq | 1.6403 | 0.0000 |
Upregulated datasets: 5; Downregulated datasets: 0.
Survival by SPATA17 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SPATA17:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SPATA17 | 128153 | 9 | 0 | 21 | |
| GSE20123 | SPATA17 | 128153 | 9 | 0 | 21 | |
| GSE43470 | SPATA17 | 128153 | 8 | 1 | 34 | |
| GSE46452 | SPATA17 | 128153 | 3 | 1 | 55 | |
| GSE47630 | SPATA17 | 128153 | 15 | 0 | 25 | |
| GSE54993 | SPATA17 | 128153 | 0 | 6 | 64 | |
| GSE54994 | SPATA17 | 128153 | 15 | 0 | 38 | |
| GSE60625 | SPATA17 | 128153 | 0 | 0 | 11 | |
| GSE74703 | SPATA17 | 128153 | 8 | 1 | 27 | |
| GSE74704 | SPATA17 | 128153 | 3 | 0 | 17 | |
| TCGA | SPATA17 | 128153 | 44 | 4 | 48 |
Total number of gains: 114; Total number of losses: 13; Total Number of normals: 361.
Somatic mutations of SPATA17:
Generating mutation plots.
Highly correlated genes for SPATA17:
Showing top 20/539 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SPATA17 | MANBA | 0.758767 | 3 | 0 | 3 |
| SPATA17 | SUPT3H | 0.727764 | 4 | 0 | 4 |
| SPATA17 | NCOR2 | 0.722113 | 3 | 0 | 3 |
| SPATA17 | PLA2G15 | 0.71616 | 3 | 0 | 3 |
| SPATA17 | DVL2 | 0.713845 | 3 | 0 | 3 |
| SPATA17 | TMEM260 | 0.711749 | 3 | 0 | 3 |
| SPATA17 | SSBP4 | 0.70118 | 3 | 0 | 3 |
| SPATA17 | GALNT6 | 0.701146 | 5 | 0 | 5 |
| SPATA17 | TAF1 | 0.699206 | 3 | 0 | 3 |
| SPATA17 | TGIF2 | 0.68866 | 4 | 0 | 4 |
| SPATA17 | MFAP2 | 0.683033 | 6 | 0 | 5 |
| SPATA17 | APH1B | 0.681016 | 4 | 0 | 3 |
| SPATA17 | HSF1 | 0.68067 | 3 | 0 | 3 |
| SPATA17 | SIVA1 | 0.67628 | 3 | 0 | 3 |
| SPATA17 | DHRS13 | 0.670653 | 3 | 0 | 3 |
| SPATA17 | SRM | 0.665052 | 3 | 0 | 3 |
| SPATA17 | TRMT12 | 0.663685 | 4 | 0 | 4 |
| SPATA17 | ZNF473 | 0.663363 | 3 | 0 | 3 |
| SPATA17 | MUCL1 | 0.662761 | 5 | 0 | 3 |
| SPATA17 | BCL2L11 | 0.659782 | 3 | 0 | 3 |
For details and further investigation, click here
