| Full name: STAM antisense RNA 1 (head to head) | Alias Symbol: locus3182 | ||
| Type: non-coding RNA | Cytoband: 10p12.33 | ||
| Entrez ID: 102723166 | HGNC ID: HGNC:49568 | Ensembl Gene: ENSG00000260589 | OMIM ID: |
Expression of STAM-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | STAM-AS1 | 102723166 | 240101_at | 0.2065 | 0.1777 | |
| GSE26886 | STAM-AS1 | 102723166 | 240101_at | -0.1267 | 0.3512 | |
| GSE45670 | STAM-AS1 | 102723166 | 240101_at | 0.2866 | 0.0148 | |
| GSE63941 | STAM-AS1 | 102723166 | 240101_at | -0.1364 | 0.6002 | |
| GSE77861 | STAM-AS1 | 102723166 | 240101_at | 0.0438 | 0.5811 | |
| SRP133303 | STAM-AS1 | 102723166 | RNAseq | 0.7069 | 0.0203 | |
| SRP159526 | STAM-AS1 | 102723166 | RNAseq | 0.9162 | 0.0494 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of STAM-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | STAM-AS1 | 102723166 | 3 | 8 | 19 | |
| GSE20123 | STAM-AS1 | 102723166 | 3 | 7 | 20 | |
| GSE43470 | STAM-AS1 | 102723166 | 3 | 4 | 36 | |
| GSE46452 | STAM-AS1 | 102723166 | 1 | 14 | 44 | |
| GSE47630 | STAM-AS1 | 102723166 | 5 | 15 | 20 | |
| GSE54993 | STAM-AS1 | 102723166 | 10 | 0 | 60 | |
| GSE54994 | STAM-AS1 | 102723166 | 4 | 9 | 40 | |
| GSE60625 | STAM-AS1 | 102723166 | 0 | 0 | 11 | |
| GSE74703 | STAM-AS1 | 102723166 | 2 | 3 | 31 | |
| GSE74704 | STAM-AS1 | 102723166 | 0 | 6 | 14 |
Total number of gains: 31; Total number of losses: 66; Total Number of normals: 295.
Somatic mutations of STAM-AS1:
Generating mutation plots.
Highly correlated genes for STAM-AS1:
Showing top 20/26 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| STAM-AS1 | ENTPD6 | 0.67912 | 3 | 0 | 3 |
| STAM-AS1 | SEC61A2 | 0.643672 | 3 | 0 | 3 |
| STAM-AS1 | PLA2G7 | 0.627752 | 3 | 0 | 3 |
| STAM-AS1 | EME1 | 0.622168 | 3 | 0 | 3 |
| STAM-AS1 | SASS6 | 0.616096 | 3 | 0 | 3 |
| STAM-AS1 | RAD54B | 0.600128 | 3 | 0 | 3 |
| STAM-AS1 | NCOA5 | 0.59541 | 3 | 0 | 3 |
| STAM-AS1 | OAS3 | 0.595257 | 3 | 0 | 3 |
| STAM-AS1 | NEK2 | 0.595183 | 3 | 0 | 3 |
| STAM-AS1 | RBM14 | 0.589775 | 3 | 0 | 3 |
| STAM-AS1 | PPIB | 0.585995 | 3 | 0 | 3 |
| STAM-AS1 | LGALS3BP | 0.585838 | 3 | 0 | 3 |
| STAM-AS1 | BRMS1 | 0.585619 | 3 | 0 | 3 |
| STAM-AS1 | CDK2AP2 | 0.58362 | 3 | 0 | 3 |
| STAM-AS1 | SRRT | 0.579419 | 3 | 0 | 3 |
| STAM-AS1 | NFRKB | 0.576522 | 3 | 0 | 3 |
| STAM-AS1 | NUDT5 | 0.573381 | 3 | 0 | 3 |
| STAM-AS1 | DHTKD1 | 0.567783 | 4 | 0 | 3 |
| STAM-AS1 | ZNF518B | 0.565381 | 3 | 0 | 3 |
| STAM-AS1 | DCP2 | 0.565286 | 3 | 0 | 3 |
For details and further investigation, click here
