STAT3

 

Full name: signal transducer and activator of transcription 3 Alias Symbol: APRF
Type: protein-coding gene Cytoband: 17q21.2
Entrez ID: 6774 HGNC ID: HGNC:11364 Ensembl Gene: ENSG00000168610 OMIM ID: 102582
Drug and gene relationship at DGIdb
Screen Evidence:

 

STAT3 involved pathways:

KEGG pathway Description View
hsa04062Chemokine signaling pathway
hsa04066HIF-1 signaling pathway
hsa04068FoxO signaling pathway
hsa04550Signaling pathways regulating pluripotency of stem cells
hsa04630Jak-STAT signaling pathway
hsa04917Prolactin signaling pathway
hsa04920Adipocytokine signaling pathway
hsa04931Insulin resistance
hsa04933AGE-RAGE signaling pathway in diabetic complications
hsa05145Toxoplasmosis
hsa05160Hepatitis C
hsa05161Hepatitis B
hsa05162Measles
hsa05169Epstein-Barr virus infection
hsa05200Pathways in cancer
hsa05205Proteoglycans in cancer
hsa05212Pancreatic cancer
hsa05221Acute myeloid leukemia
hsa05321Inflammatory bowel disease (IBD)

 

Expression of STAT3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 STAT3 6774 208991_at -0.0362 0.9513
GSE20347 STAT3 6774 208991_at -0.2203 0.3488
GSE23400 STAT3 6774 208991_at 0.1075 0.1549
GSE26886 STAT3 6774 208991_at -0.7374 0.0278
GSE29001 STAT3 6774 208991_at -0.0957 0.7666
GSE38129 STAT3 6774 208991_at -0.1990 0.2169
GSE45670 STAT3 6774 208991_at 0.4102 0.0021
GSE53622 STAT3 6774 78123 0.1612 0.0053
GSE53624 STAT3 6774 78123 -0.0882 0.1052
GSE63941 STAT3 6774 208991_at -0.7312 0.2250
GSE77861 STAT3 6774 208991_at 0.3205 0.2129
GSE97050 STAT3 6774 A_24_P116805 0.8806 0.1095
SRP007169 STAT3 6774 RNAseq -0.5679 0.0766
SRP008496 STAT3 6774 RNAseq -0.8810 0.0001
SRP064894 STAT3 6774 RNAseq 0.1104 0.5478
SRP133303 STAT3 6774 RNAseq 0.2118 0.1535
SRP159526 STAT3 6774 RNAseq 0.1620 0.6249
SRP193095 STAT3 6774 RNAseq -0.0404 0.7717
SRP219564 STAT3 6774 RNAseq -0.0372 0.9068
TCGA STAT3 6774 RNAseq 0.0249 0.5594

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by STAT3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of STAT3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 STAT3 6774 6 2 22
GSE20123 STAT3 6774 6 2 22
GSE43470 STAT3 6774 1 2 40
GSE46452 STAT3 6774 34 0 25
GSE47630 STAT3 6774 8 1 31
GSE54993 STAT3 6774 3 4 63
GSE54994 STAT3 6774 8 5 40
GSE60625 STAT3 6774 4 0 7
GSE74703 STAT3 6774 1 1 34
GSE74704 STAT3 6774 4 1 15
TCGA STAT3 6774 23 6 67

Total number of gains: 98; Total number of losses: 24; Total Number of normals: 366.  


 

Somatic mutations of STAT3:

 

Generating mutation plots.

 

Highly correlated genes for STAT3:

 

Showing top 20/45 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
STAT3MCOLN20.625126303
STAT3CD140.621044404
STAT3KLK60.611303403
STAT3TRAPPC110.596275303
STAT3LPAR60.596101404
STAT3TMC80.58902303
STAT3FAM43A0.587386403
STAT3HSD17B20.587279303
STAT3SLC28A30.585991403
STAT3FRMD80.583749403
STAT3IRAK20.580655303
STAT3TOP10.576559403
STAT3LPXN0.574819403
STAT3SLCO2A10.570002303
STAT3S100A70.562701504
STAT3CSF2RB0.561889603
STAT3CDK5RAP30.560981403
STAT3COASY0.558416403
STAT3SOD20.556515504
STAT3PDZK1IP10.553402604

For details and further investigation, click here