| Full name: transmembrane 9 superfamily member 2 | Alias Symbol: P76 | ||
| Type: protein-coding gene | Cytoband: 13q32.3 | ||
| Entrez ID: 9375 | HGNC ID: HGNC:11865 | Ensembl Gene: ENSG00000125304 | OMIM ID: 604678 |
Screen Evidence:
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Expression of TM9SF2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TM9SF2 | 9375 | 201078_at | -0.0752 | 0.8542 | |
| GSE20347 | TM9SF2 | 9375 | 201078_at | -0.4533 | 0.0218 | |
| GSE23400 | TM9SF2 | 9375 | 201078_at | -0.0765 | 0.4338 | |
| GSE26886 | TM9SF2 | 9375 | 201078_at | -0.6983 | 0.0091 | |
| GSE29001 | TM9SF2 | 9375 | 201078_at | -0.2591 | 0.4702 | |
| GSE38129 | TM9SF2 | 9375 | 201078_at | -0.1249 | 0.4080 | |
| GSE45670 | TM9SF2 | 9375 | 201078_at | 0.1989 | 0.1439 | |
| GSE53622 | TM9SF2 | 9375 | 38886 | 0.0718 | 0.3076 | |
| GSE53624 | TM9SF2 | 9375 | 38886 | -0.0649 | 0.3484 | |
| GSE63941 | TM9SF2 | 9375 | 201078_at | -0.2085 | 0.6137 | |
| GSE77861 | TM9SF2 | 9375 | 201078_at | -0.5340 | 0.0331 | |
| GSE97050 | TM9SF2 | 9375 | A_24_P210399 | 0.3263 | 0.2152 | |
| SRP007169 | TM9SF2 | 9375 | RNAseq | -0.6458 | 0.0273 | |
| SRP008496 | TM9SF2 | 9375 | RNAseq | -0.5489 | 0.0037 | |
| SRP064894 | TM9SF2 | 9375 | RNAseq | 0.2261 | 0.1075 | |
| SRP133303 | TM9SF2 | 9375 | RNAseq | 0.0667 | 0.6028 | |
| SRP159526 | TM9SF2 | 9375 | RNAseq | -0.1026 | 0.7868 | |
| SRP193095 | TM9SF2 | 9375 | RNAseq | -0.4192 | 0.0235 | |
| SRP219564 | TM9SF2 | 9375 | RNAseq | 0.2689 | 0.4611 | |
| TCGA | TM9SF2 | 9375 | RNAseq | -0.1041 | 0.0150 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by TM9SF2 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TM9SF2:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TM9SF2 | 9375 | 3 | 8 | 19 | |
| GSE20123 | TM9SF2 | 9375 | 3 | 7 | 20 | |
| GSE43470 | TM9SF2 | 9375 | 4 | 12 | 27 | |
| GSE46452 | TM9SF2 | 9375 | 0 | 32 | 27 | |
| GSE47630 | TM9SF2 | 9375 | 3 | 26 | 11 | |
| GSE54993 | TM9SF2 | 9375 | 11 | 4 | 55 | |
| GSE54994 | TM9SF2 | 9375 | 6 | 10 | 37 | |
| GSE60625 | TM9SF2 | 9375 | 0 | 3 | 8 | |
| GSE74703 | TM9SF2 | 9375 | 3 | 10 | 23 | |
| GSE74704 | TM9SF2 | 9375 | 1 | 7 | 12 | |
| TCGA | TM9SF2 | 9375 | 13 | 34 | 49 |
Total number of gains: 47; Total number of losses: 153; Total Number of normals: 288.
Somatic mutations of TM9SF2:
Generating mutation plots.
Highly correlated genes for TM9SF2:
Showing top 20/208 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TM9SF2 | STK38 | 0.70215 | 3 | 0 | 3 |
| TM9SF2 | ZNF564 | 0.693391 | 3 | 0 | 3 |
| TM9SF2 | SOX21-AS1 | 0.68508 | 3 | 0 | 3 |
| TM9SF2 | PRKCH | 0.65393 | 4 | 0 | 3 |
| TM9SF2 | C15orf48 | 0.652827 | 3 | 0 | 3 |
| TM9SF2 | RBM5 | 0.648205 | 3 | 0 | 3 |
| TM9SF2 | PRRC1 | 0.647523 | 4 | 0 | 3 |
| TM9SF2 | CRYBG3 | 0.643288 | 3 | 0 | 3 |
| TM9SF2 | MAL2 | 0.639041 | 4 | 0 | 3 |
| TM9SF2 | MRPS18A | 0.634772 | 3 | 0 | 3 |
| TM9SF2 | HMGN1 | 0.632538 | 3 | 0 | 3 |
| TM9SF2 | TMED3 | 0.63219 | 6 | 0 | 6 |
| TM9SF2 | SGPL1 | 0.625221 | 3 | 0 | 3 |
| TM9SF2 | RAP2A | 0.6235 | 5 | 0 | 5 |
| TM9SF2 | LGMN | 0.622893 | 4 | 0 | 3 |
| TM9SF2 | RER1 | 0.622211 | 4 | 0 | 4 |
| TM9SF2 | COPZ1 | 0.621208 | 4 | 0 | 3 |
| TM9SF2 | VPS26A | 0.61898 | 7 | 0 | 6 |
| TM9SF2 | TMEM59 | 0.618581 | 7 | 0 | 6 |
| TM9SF2 | IER3IP1 | 0.616217 | 3 | 0 | 3 |
For details and further investigation, click here
