| Full name: transmembrane protein 52B | Alias Symbol: FLJ31166 | ||
| Type: protein-coding gene | Cytoband: 12p13.2 | ||
| Entrez ID: 120939 | HGNC ID: HGNC:26438 | Ensembl Gene: ENSG00000165685 | OMIM ID: |
Expression of TMEM52B:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TMEM52B | 120939 | 236646_at | 0.3427 | 0.4006 | |
| GSE26886 | TMEM52B | 120939 | 236646_at | 0.6622 | 0.0719 | |
| GSE45670 | TMEM52B | 120939 | 236646_at | 0.3016 | 0.2693 | |
| GSE53622 | TMEM52B | 120939 | 44723 | 1.6114 | 0.0000 | |
| GSE53624 | TMEM52B | 120939 | 44723 | 1.0629 | 0.0000 | |
| GSE63941 | TMEM52B | 120939 | 236646_at | 1.1788 | 0.5655 | |
| GSE77861 | TMEM52B | 120939 | 236646_at | -0.0073 | 0.9351 | |
| SRP133303 | TMEM52B | 120939 | RNAseq | 1.1415 | 0.0010 | |
| SRP219564 | TMEM52B | 120939 | RNAseq | 3.6237 | 0.0005 |
Upregulated datasets: 4; Downregulated datasets: 0.
Survival by TMEM52B expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of TMEM52B:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TMEM52B | 120939 | 6 | 2 | 22 | |
| GSE20123 | TMEM52B | 120939 | 6 | 2 | 22 | |
| GSE43470 | TMEM52B | 120939 | 8 | 3 | 32 | |
| GSE46452 | TMEM52B | 120939 | 10 | 1 | 48 | |
| GSE47630 | TMEM52B | 120939 | 14 | 2 | 24 | |
| GSE54993 | TMEM52B | 120939 | 1 | 10 | 59 | |
| GSE54994 | TMEM52B | 120939 | 9 | 2 | 42 | |
| GSE60625 | TMEM52B | 120939 | 0 | 1 | 10 | |
| GSE74703 | TMEM52B | 120939 | 8 | 2 | 26 | |
| GSE74704 | TMEM52B | 120939 | 4 | 1 | 15 | |
| TCGA | TMEM52B | 120939 | 39 | 6 | 51 |
Total number of gains: 105; Total number of losses: 32; Total Number of normals: 351.
Somatic mutations of TMEM52B:
Generating mutation plots.
Highly correlated genes for TMEM52B:
Showing top 20/138 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TMEM52B | NLRP7 | 0.667498 | 4 | 0 | 3 |
| TMEM52B | OLR1 | 0.650115 | 5 | 0 | 4 |
| TMEM52B | FMNL3 | 0.64997 | 3 | 0 | 3 |
| TMEM52B | APOE | 0.643659 | 3 | 0 | 3 |
| TMEM52B | PLA2G7 | 0.639418 | 3 | 0 | 3 |
| TMEM52B | IGFBP3 | 0.633263 | 3 | 0 | 3 |
| TMEM52B | USP18 | 0.63325 | 3 | 0 | 3 |
| TMEM52B | ADAM32 | 0.632158 | 3 | 0 | 3 |
| TMEM52B | SUCNR1 | 0.620866 | 3 | 0 | 3 |
| TMEM52B | C5orf15 | 0.619043 | 3 | 0 | 3 |
| TMEM52B | PSMB3 | 0.614095 | 4 | 0 | 3 |
| TMEM52B | ADAMTS12 | 0.612295 | 3 | 0 | 3 |
| TMEM52B | RAI14 | 0.610635 | 4 | 0 | 3 |
| TMEM52B | SDS | 0.607703 | 3 | 0 | 3 |
| TMEM52B | GPR19 | 0.605764 | 5 | 0 | 4 |
| TMEM52B | MCM5 | 0.605154 | 3 | 0 | 3 |
| TMEM52B | MARCKSL1 | 0.604441 | 4 | 0 | 3 |
| TMEM52B | NOX4 | 0.604195 | 3 | 0 | 3 |
| TMEM52B | MAD2L2 | 0.604104 | 3 | 0 | 3 |
| TMEM52B | MMP3 | 0.598142 | 3 | 0 | 3 |
For details and further investigation, click here
