| Full name: AVL9 cell migration associated | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 7p14.3 | ||
| Entrez ID: 23080 | HGNC ID: HGNC:28994 | Ensembl Gene: ENSG00000105778 | OMIM ID: 612927 |
| Drug and gene relationship at DGIdb | |||
Expression of AVL9:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | AVL9 | 23080 | 212474_at | 0.6588 | 0.1507 | |
| GSE20347 | AVL9 | 23080 | 212474_at | 0.6194 | 0.0000 | |
| GSE23400 | AVL9 | 23080 | 212474_at | 0.4565 | 0.0000 | |
| GSE26886 | AVL9 | 23080 | 212474_at | -0.1622 | 0.5874 | |
| GSE29001 | AVL9 | 23080 | 212474_at | 0.5451 | 0.0121 | |
| GSE38129 | AVL9 | 23080 | 212474_at | 0.6655 | 0.0000 | |
| GSE45670 | AVL9 | 23080 | 212474_at | 0.3192 | 0.0303 | |
| GSE53622 | AVL9 | 23080 | 2638 | 0.3950 | 0.0000 | |
| GSE53624 | AVL9 | 23080 | 9403 | -0.0665 | 0.5333 | |
| GSE63941 | AVL9 | 23080 | 212474_at | -0.2989 | 0.5014 | |
| GSE77861 | AVL9 | 23080 | 212474_at | 0.5406 | 0.1700 | |
| GSE97050 | AVL9 | 23080 | A_24_P272967 | 0.3760 | 0.6712 | |
| SRP007169 | AVL9 | 23080 | RNAseq | 0.3032 | 0.3826 | |
| SRP008496 | AVL9 | 23080 | RNAseq | 0.1940 | 0.4602 | |
| SRP064894 | AVL9 | 23080 | RNAseq | 0.0019 | 0.9919 | |
| SRP133303 | AVL9 | 23080 | RNAseq | 0.4098 | 0.0027 | |
| SRP159526 | AVL9 | 23080 | RNAseq | 0.0654 | 0.7322 | |
| SRP193095 | AVL9 | 23080 | RNAseq | 0.0703 | 0.5407 | |
| SRP219564 | AVL9 | 23080 | RNAseq | -0.0672 | 0.8624 | |
| TCGA | AVL9 | 23080 | RNAseq | 0.0436 | 0.4834 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by AVL9 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of AVL9:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | AVL9 | 23080 | 16 | 0 | 14 | |
| GSE20123 | AVL9 | 23080 | 16 | 0 | 14 | |
| GSE43470 | AVL9 | 23080 | 4 | 1 | 38 | |
| GSE46452 | AVL9 | 23080 | 11 | 1 | 47 | |
| GSE47630 | AVL9 | 23080 | 8 | 1 | 31 | |
| GSE54993 | AVL9 | 23080 | 0 | 6 | 64 | |
| GSE54994 | AVL9 | 23080 | 19 | 3 | 31 | |
| GSE60625 | AVL9 | 23080 | 0 | 0 | 11 | |
| GSE74703 | AVL9 | 23080 | 4 | 1 | 31 | |
| GSE74704 | AVL9 | 23080 | 10 | 0 | 10 | |
| TCGA | AVL9 | 23080 | 56 | 7 | 33 |
Total number of gains: 144; Total number of losses: 20; Total Number of normals: 324.
Somatic mutations of AVL9:
Generating mutation plots.
Highly correlated genes for AVL9:
Showing top 20/196 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| AVL9 | LRRC8D | 0.663606 | 8 | 0 | 7 |
| AVL9 | FPR1 | 0.654338 | 3 | 0 | 3 |
| AVL9 | FBRSL1 | 0.652788 | 3 | 0 | 3 |
| AVL9 | CBX3 | 0.647089 | 9 | 0 | 7 |
| AVL9 | KIF15 | 0.638642 | 7 | 0 | 5 |
| AVL9 | PUS7 | 0.634508 | 7 | 0 | 6 |
| AVL9 | SH3BP4 | 0.632589 | 7 | 0 | 6 |
| AVL9 | IER5L | 0.632135 | 3 | 0 | 3 |
| AVL9 | CDCA7L | 0.625902 | 4 | 0 | 4 |
| AVL9 | ERI1 | 0.622454 | 4 | 0 | 3 |
| AVL9 | ABCA13 | 0.619312 | 3 | 0 | 3 |
| AVL9 | THNSL1 | 0.611669 | 6 | 0 | 4 |
| AVL9 | XPR1 | 0.611235 | 4 | 0 | 4 |
| AVL9 | DESI2 | 0.608282 | 8 | 0 | 6 |
| AVL9 | HNRNPA2B1 | 0.605519 | 8 | 0 | 5 |
| AVL9 | CENPK | 0.605094 | 4 | 0 | 3 |
| AVL9 | CDK6 | 0.602308 | 6 | 0 | 4 |
| AVL9 | COTL1 | 0.60014 | 3 | 0 | 3 |
| AVL9 | CHSY1 | 0.597788 | 6 | 0 | 5 |
| AVL9 | TAF1A | 0.597222 | 8 | 0 | 6 |
For details and further investigation, click here
