C1orf112

 

Full name: chromosome 1 open reading frame 112 Alias Symbol: FLJ10706
Type: protein-coding gene Cytoband: 1q24.2
Entrez ID: 55732 HGNC ID: HGNC:25565 Ensembl Gene: ENSG00000000460 OMIM ID: 
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of C1orf112:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C1orf112 55732 220840_s_at 1.3674 0.0213
GSE20347 C1orf112 55732 220840_s_at 1.0689 0.0000
GSE23400 C1orf112 55732 220840_s_at 0.5947 0.0000
GSE26886 C1orf112 55732 220840_s_at 0.5645 0.0002
GSE29001 C1orf112 55732 220840_s_at 0.7303 0.0013
GSE38129 C1orf112 55732 220840_s_at 1.3360 0.0000
GSE45670 C1orf112 55732 220840_s_at 1.0061 0.0000
GSE63941 C1orf112 55732 220840_s_at 2.0920 0.0003
GSE77861 C1orf112 55732 220840_s_at 0.5179 0.0209
GSE97050 C1orf112 55732 A_23_P11862 0.2559 0.3159
SRP007169 C1orf112 55732 RNAseq 1.8834 0.0009
SRP008496 C1orf112 55732 RNAseq 1.2717 0.0291
SRP064894 C1orf112 55732 RNAseq 1.0729 0.0000
SRP133303 C1orf112 55732 RNAseq 1.2166 0.0000
SRP159526 C1orf112 55732 RNAseq 1.6007 0.0000
SRP193095 C1orf112 55732 RNAseq 0.7702 0.0000
SRP219564 C1orf112 55732 RNAseq 1.1855 0.0023
TCGA C1orf112 55732 RNAseq 0.6897 0.0000

Upregulated datasets: 11; Downregulated datasets: 0.  


 

Survival by C1orf112 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of C1orf112:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C1orf112 55732 12 1 17
GSE20123 C1orf112 55732 12 1 17
GSE43470 C1orf112 55732 7 2 34
GSE46452 C1orf112 55732 3 1 55
GSE47630 C1orf112 55732 14 0 26
GSE54993 C1orf112 55732 0 6 64
GSE54994 C1orf112 55732 16 0 37
GSE60625 C1orf112 55732 0 0 11
GSE74703 C1orf112 55732 7 2 27
GSE74704 C1orf112 55732 6 0 14
TCGA C1orf112 55732 43 3 50

Total number of gains: 120; Total number of losses: 16; Total Number of normals: 352.  


 

Somatic mutations of C1orf112:

 

Generating mutation plots.

 

Highly correlated genes for C1orf112:

 

Showing top 20/2030 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C1orf112C12orf570.806432303
C1orf112MRPL140.803946505
C1orf112EXO10.79944310010
C1orf112SKA30.798033505
C1orf112HJURP0.7954371009
C1orf112MMS190.790336303
C1orf112E2F70.786466303
C1orf112CKS1B0.78511111010
C1orf112GMNN0.78485611010
C1orf112CENPF0.78226811011
C1orf112POLE20.78091808
C1orf112UBE2T0.780254706
C1orf112DTL0.77709211011
C1orf112ERCC6L0.776448908
C1orf112NEK20.77633711010
C1orf112CEP550.7742031009
C1orf112MCM30.77353810010
C1orf112NUF20.771377707
C1orf112BUB10.770707907
C1orf112DBF40.77047110010

For details and further investigation, click here