| Full name: long intergenic non-protein coding RNA 479 | Alias Symbol: PRED76|FLJ32835 | ||
| Type: non-coding RNA | Cytoband: 21q22.3 | ||
| Entrez ID: 150135 | HGNC ID: HGNC:19727 | Ensembl Gene: ENSG00000236384 | OMIM ID: |
Expression of LINC00479:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00479 | 150135 | 1553918_at | -0.1304 | 0.7106 | |
| GSE26886 | LINC00479 | 150135 | 1553918_at | 0.0433 | 0.8820 | |
| GSE45670 | LINC00479 | 150135 | 1553918_at | 0.0916 | 0.6874 | |
| GSE53622 | LINC00479 | 150135 | 66721 | -0.0736 | 0.2224 | |
| GSE53624 | LINC00479 | 150135 | 66721 | 0.0324 | 0.6414 | |
| GSE63941 | LINC00479 | 150135 | 1553918_at | 0.8445 | 0.0120 | |
| GSE77861 | LINC00479 | 150135 | 1553918_at | -0.1695 | 0.1265 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00479 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00479:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00479 | 150135 | 2 | 8 | 20 | |
| GSE20123 | LINC00479 | 150135 | 2 | 8 | 20 | |
| GSE43470 | LINC00479 | 150135 | 0 | 13 | 30 | |
| GSE46452 | LINC00479 | 150135 | 1 | 21 | 37 | |
| GSE47630 | LINC00479 | 150135 | 6 | 17 | 17 | |
| GSE54993 | LINC00479 | 150135 | 8 | 1 | 61 | |
| GSE54994 | LINC00479 | 150135 | 3 | 8 | 42 | |
| GSE60625 | LINC00479 | 150135 | 0 | 0 | 11 | |
| GSE74703 | LINC00479 | 150135 | 0 | 10 | 26 | |
| GSE74704 | LINC00479 | 150135 | 1 | 4 | 15 | |
| TCGA | LINC00479 | 150135 | 7 | 41 | 48 |
Total number of gains: 30; Total number of losses: 131; Total Number of normals: 327.
Somatic mutations of LINC00479:
Generating mutation plots.
Highly correlated genes for LINC00479:
Showing top 20/33 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00479 | RAC1 | 0.71543 | 3 | 0 | 3 |
| LINC00479 | CD1A | 0.693677 | 3 | 0 | 3 |
| LINC00479 | RARG | 0.644306 | 3 | 0 | 3 |
| LINC00479 | TRIM29 | 0.640862 | 3 | 0 | 3 |
| LINC00479 | VAMP8 | 0.625644 | 3 | 0 | 3 |
| LINC00479 | MREG | 0.615233 | 3 | 0 | 3 |
| LINC00479 | RBM47 | 0.60746 | 3 | 0 | 3 |
| LINC00479 | C12orf74 | 0.607005 | 4 | 0 | 3 |
| LINC00479 | PAIP2B | 0.605028 | 3 | 0 | 3 |
| LINC00479 | ADK | 0.603073 | 3 | 0 | 3 |
| LINC00479 | EPB41L4A | 0.599067 | 3 | 0 | 3 |
| LINC00479 | FAM160A1 | 0.59396 | 3 | 0 | 3 |
| LINC00479 | PRKAG1 | 0.589957 | 3 | 0 | 3 |
| LINC00479 | TPPP2 | 0.587624 | 3 | 0 | 3 |
| LINC00479 | HMOX2 | 0.584996 | 3 | 0 | 3 |
| LINC00479 | MPZL3 | 0.58248 | 3 | 0 | 3 |
| LINC00479 | GOT1 | 0.582305 | 3 | 0 | 3 |
| LINC00479 | PLAC8 | 0.581047 | 3 | 0 | 3 |
| LINC00479 | MVK | 0.570405 | 4 | 0 | 3 |
| LINC00479 | LEAP2 | 0.568921 | 3 | 0 | 3 |
For details and further investigation, click here
